Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_12080 | Not Available | - | 4441906 - 4442529 | 24284.6 |
| transketolase | SAMN06296052_12081 | Not Available | - | 4442559 - 4443518 | 34578.7 |
| ca-activated chloride channel family protein | SAMN06296052_12082 | Not Available | - | 4443519 - 4444913 | 51609.5 |
| transketolase | SAMN06296052_12083 | Not Available | - | 4444977 - 4445834 | 31393.2 |
| peroxiredoxin q/bcp | SAMN06296052_12084 | Not Available | - | 4446042 - 4446491 | 17167.3 |
| peptidase family m23 | SAMN06296052_12085 | Not Available | - | 4446499 - 4448424 | 72053.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06296052_12086 | Not Available | - | 4448384 - 4448995 | 22962.6 |
| peptidase family m48 | SAMN06296052_12087 | Not Available | + | 4449369 - 4450166 | 29059.9 |
| hypothetical protein | SAMN06296052_12088 | Not Available | + | 4450176 - 4450814 | 23349.1 |
| dna polymerase-3 subunit epsilon | SAMN06296052_12089 | Not Available | - | 4450920 - 4451726 | 31315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.