Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN06296052_12050 | Not Available | + | 4405902 - 4406717 | 29429.8 |
| hypothetical protein | SAMN06296052_12051 | Not Available | - | 4406884 - 4407621 | 28918.5 |
| Trna-lys | Not Available | Not Available | + | 4407695 - 4407770 | Not Available |
| Trna-lys | Not Available | Not Available | + | 4407907 - 4407979 | Not Available |
| protein of unknown function | SAMN06296052_12054 | Not Available | + | 4408106 - 4408720 | 22657.7 |
| hypothetical protein | SAMN06296052_12055 | Not Available | - | 4408761 - 4410122 | 51583.8 |
| abc-2 type transport system atp-binding protein | SAMN06296052_12056 | Not Available | - | 4410181 - 4410939 | 27917.7 |
| Trna-leu | Not Available | Not Available | + | 4411235 - 4411316 | Not Available |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN06296052_12058 | Not Available | - | 4411622 - 4413130 | 57948.1 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN06296052_12059 | Not Available | - | 4413194 - 4413958 | 29047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.