Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_119101 | Not Available | + | 4344388 - 4345383 | 37179.2 |
| bacteroides conjugative transposon trak protein | SAMN06296052_119102 | Not Available | + | 4345399 - 4346007 | 23052.8 |
| hypothetical protein | SAMN06296052_119103 | Not Available | + | 4345985 - 4346353 | 14106.0 |
| bacteroides conjugative transposon tram protein | SAMN06296052_119104 | Not Available | + | 4346340 - 4347506 | 43424.2 |
| bacteroides conjugative transposon tran protein | SAMN06296052_119105 | Not Available | + | 4347516 - 4348310 | 30311.8 |
| type iv secretory system conjugative dna transfer | SAMN06296052_119106 | Not Available | + | 4348370 - 4350337 | 73597.1 |
| helix-turn-helix | SAMN06296052_119107 | Not Available | + | 4350334 - 4350687 | 12781.4 |
| peptidase family m23 | SAMN06296052_119108 | Not Available | - | 4350702 - 4350980 | 9994.08 |
| protein of unknown function | SAMN06296052_119109 | Not Available | + | 4351441 - 4352073 | 23713.4 |
| toprim-like | SAMN06296052_119110 | Not Available | + | 4352084 - 4353181 | 41564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.