Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN06296052_11991 | Not Available | - | 4334693 - 4335982 | 49290.4 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN06296052_11992 | Not Available | + | 4336880 - 4338433 | 58087.6 |
| chromosome partitioning protein | SAMN06296052_11993 | Not Available | + | 4338443 - 4339069 | 23768.5 |
| hypothetical protein | SAMN06296052_11994 | Not Available | + | 4339201 - 4339611 | 15551.8 |
| hypothetical protein | SAMN06296052_11995 | Not Available | + | 4339677 - 4339985 | 11744.9 |
| protein of unknown function | SAMN06296052_11996 | Not Available | + | 4340021 - 4340317 | 10234.9 |
| hypothetical protein | SAMN06296052_11997 | Not Available | + | 4340319 - 4340627 | 11212.8 |
| bacteroides conjugation system atpase, trag family | SAMN06296052_11998 | Not Available | + | 4340680 - 4343103 | 92146.3 |
| hypothetical protein | SAMN06296052_11999 | Not Available | + | 4343078 - 4343749 | 25135.9 |
| hypothetical protein | SAMN06296052_119100 | Not Available | + | 4343754 - 4344404 | 24823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.