Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11961 | Not Available | - | 4309577 - 4309861 | 11196.9 |
| ahpc/tsa family protein | SAMN06296052_11962 | Not Available | + | 4310859 - 4311374 | 18783.9 |
| signal transduction histidine kinase | SAMN06296052_11963 | Not Available | - | 4311619 - 4312896 | 48592.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06296052_11964 | Not Available | - | 4312896 - 4313570 | 25145.1 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN06296052_11965 | Not Available | - | 4313702 - 4314451 | 27716.2 |
| putative beta-lactamase-inhibitor-like, pepsy-like | SAMN06296052_11966 | Not Available | - | 4314651 - 4315103 | 16698.1 |
| mobilisation protein (mobc) | SAMN06296052_11967 | Not Available | + | 4316118 - 4316549 | 16482.6 |
| tm2 domain-containing membrane protein yozv | SAMN06296052_11968 | Not Available | + | 4316880 - 4317251 | 13994.1 |
| hypothetical protein | SAMN06296052_11969 | Not Available | + | 4317852 - 4318034 | 6634.9 |
| hypothetical protein | SAMN06296052_11970 | Not Available | + | 4318252 - 4318494 | 8747.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.