Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. As a heterotrophic organism, it derives its energy from organic compounds, necessitating the presence of other carbon sources for growth. This microbe displays an aerobic metabolism, requiring oxygen for its metabolic processes. The morphological characteristics of P. ummariensis, combined with its physiological traits, suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of organic material in its environment. Such bacteria are commonly found in diverse habitats, including soil and aquatic systems, where they may influence nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions implies that P. ummariensis could participate in processes such as the oxidation of organic substrates, potentially impacting the dynamics of microbial communities in oxygen-rich environments. Understanding the ecological role of Pontibacter ummariensis may provide insights into its contribution to biogeochemical cycles, particularly in regions where organic material is abundant and oxygen levels are sufficient to support aerobic microbial life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis

Accession NumberFZOQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
oxygen toleranceSAMN06296052_101135Not Available+125452 - 12689154208.9
chorismate synthaseSAMN06296052_101136Not Available+126895 - 12797438684.2
abc-type lipopolysaccharide export system, atpase componentSAMN06296052_101137Not Available-128344 - 12901825798.2
hypothetical proteinSAMN06296052_101138Not Available-129011 - 12933412397.6
transporter, uit6 familySAMN06296052_101139Not Available-129443 - 13082851082.3
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN06296052_101140Not Available+131044 - 13165522035.2
secd/secf fusion proteinSAMN06296052_101141Not Available-132325 - 135294107925.0
hypothetical proteinSAMN06296052_101142Not Available-135502 - 13582511294.5
trk system potassium uptake protein trkaSAMN06296052_101143Not Available-135923 - 13661525726.2
uridine kinaseSAMN06296052_101144Not Available-136612 - 13723223869.6

Displaying genes 191 – 200 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites