Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06296052_10580 | Not Available | + | 1632175 - 1633851 | 62023.3 |
| hypothetical protein | SAMN06296052_10581 | Not Available | + | 1633873 - 1634199 | 11718.9 |
| glycine/d-amino acid oxidase | SAMN06296052_10582 | Not Available | + | 1634371 - 1635906 | 56135.2 |
| hypothetical protein | SAMN06296052_10583 | Not Available | - | 1636482 - 1636751 | 10282.1 |
| protein of unknown function | SAMN06296052_10584 | Not Available | - | 1636861 - 1637208 | 13259.6 |
| hypothetical protein | SAMN06296052_10585 | Not Available | - | 1637382 - 1638764 | 51995.1 |
| cu2+-exporting atpase | SAMN06296052_10586 | Not Available | - | 1638795 - 1640924 | 76631.0 |
| hypothetical protein | SAMN06296052_10587 | Not Available | - | 1640939 - 1641256 | 11664.9 |
| hypothetical protein | SAMN06296052_10588 | Not Available | - | 1641330 - 1641995 | 24184.5 |
| helix-turn-helix domain-containing protein | SAMN06296052_10589 | Not Available | - | 1642209 - 1642853 | 24032.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
