Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN06296052_10520 | Not Available | - | 1565352 - 1566428 | 39024.5 |
| hypothetical protein | SAMN06296052_10521 | Not Available | + | 1566455 - 1566697 | 9637.12 |
| hypothetical protein | SAMN06296052_10522 | Not Available | - | 1567072 - 1567230 | 5500.88 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_10523 | Not Available | + | 1567250 - 1570384 | 113904.0 |
| starch-binding associating with outer membrane | SAMN06296052_10524 | Not Available | + | 1570397 - 1572361 | 72546.5 |
| mannonate dehydratase | SAMN06296052_10525 | Not Available | + | 1573039 - 1574247 | 45179.1 |
| d-glucuronate isomerase | SAMN06296052_10526 | Not Available | + | 1574213 - 1575676 | 55005.3 |
| mfs transporter, acs family, hexuronate transporter | SAMN06296052_10527 | Not Available | + | 1575704 - 1577026 | 48293.2 |
| glycosyl hydrolase family 115 | SAMN06296052_10528 | Not Available | + | 1577084 - 1580029 | 110043.0 |
| alpha-n-arabinofuranosidase | SAMN06296052_10529 | Not Available | + | 1580119 - 1581837 | 64000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.