Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10510 | Not Available | + | 1552178 - 1553500 | 51037.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN06296052_10511 | Not Available | - | 1553605 - 1554258 | 23207.1 |
| 2-dehydro-3-deoxygluconokinase | SAMN06296052_10512 | Not Available | - | 1554276 - 1555307 | 37942.9 |
| mfs transporter, sp family, xylose:h+ symportor | SAMN06296052_10513 | Not Available | - | 1555459 - 1556913 | 52627.3 |
| d-xylose isomerase | SAMN06296052_10514 | Not Available | - | 1556954 - 1558285 | 50288.6 |
| xylulokinase | SAMN06296052_10515 | Not Available | - | 1558318 - 1559802 | 53925.0 |
| transcriptional regulator, laci family | SAMN06296052_10516 | Not Available | + | 1560023 - 1561051 | 38373.2 |
| endo-1,4-beta-xylanase | SAMN06296052_10517 | Not Available | - | 1561168 - 1562334 | 43752.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_10518 | Not Available | - | 1562390 - 1563148 | 26719.2 |
| alpha-glucuronidase | SAMN06296052_10519 | Not Available | - | 1563170 - 1565335 | 81904.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.