Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_104252 | Not Available | - | 1540657 - 1540735 | 2946.77 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN06296052_1051 | Not Available | + | 1541258 - 1544383 | 114770.0 |
| hydroxypyruvate isomerase | SAMN06296052_1052 | Not Available | + | 1544432 - 1545316 | 33045.9 |
| hydroxypyruvate isomerase | SAMN06296052_1053 | Not Available | + | 1545465 - 1546361 | 32914.5 |
| thiamine biosynthesis lipoprotein | SAMN06296052_1054 | Not Available | - | 1546482 - 1547483 | 36895.3 |
| predicted dehydrogenase | SAMN06296052_1055 | Not Available | - | 1547636 - 1548955 | 48942.7 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN06296052_1056 | Not Available | - | 1548992 - 1549996 | 37709.2 |
| hypothetical protein | SAMN06296052_1057 | Not Available | - | 1550804 - 1551046 | 9328.28 |
| hypothetical protein | SAMN06296052_1058 | Not Available | + | 1551181 - 1551543 | 12972.4 |
| xylose isomerase-like tim barrel | SAMN06296052_1059 | Not Available | + | 1551573 - 1552061 | 18317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.