Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN06296052_104242 | Not Available | + | 1529201 - 1530535 | 49054.9 |
| pas domain s-box-containing protein | SAMN06296052_104243 | Not Available | - | 1530611 - 1532962 | 87578.4 |
| response regulator receiver domain-containing protein | SAMN06296052_104244 | Not Available | - | 1533008 - 1533421 | 15701.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06296052_104245 | Not Available | - | 1533441 - 1534157 | 26770.4 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06296052_104246 | Not Available | - | 1534166 - 1535683 | 56953.8 |
| trna(arg) a34 adenosine deaminase tada | SAMN06296052_104247 | Not Available | - | 1535807 - 1536280 | 17630.9 |
| hypothetical protein | SAMN06296052_104248 | Not Available | - | 1536590 - 1537075 | 18887.6 |
| hypothetical protein | SAMN06296052_104249 | Not Available | - | 1537123 - 1537629 | 18634.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06296052_104250 | Not Available | + | 1538504 - 1539580 | 40767.1 |
| hypothetical protein | SAMN06296052_104251 | Not Available | + | 1540007 - 1540603 | 23459.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.