Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. As a heterotrophic organism, it derives its energy from organic compounds, necessitating the presence of other carbon sources for growth. This microbe displays an aerobic metabolism, requiring oxygen for its metabolic processes. The morphological characteristics of P. ummariensis, combined with its physiological traits, suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of organic material in its environment. Such bacteria are commonly found in diverse habitats, including soil and aquatic systems, where they may influence nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions implies that P. ummariensis could participate in processes such as the oxidation of organic substrates, potentially impacting the dynamics of microbial communities in oxygen-rich environments. Understanding the ecological role of Pontibacter ummariensis may provide insights into its contribution to biogeochemical cycles, particularly in regions where organic material is abundant and oxygen levels are sufficient to support aerobic microbial life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis

Accession NumberFZOQ00000000.1

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein involved in gliding motility gldfSAMN06296052_104221Not Available+1507184 - 150791226989.7
gliding-associated putative abc transporter substrate-binding component gldgSAMN06296052_104222Not Available+1507906 - 150959463849.7
dna polymerase iii, beta subunitSAMN06296052_104223Not Available+1509826 - 151095041903.2
endonuclease/exonuclease/phosphatase family proteinSAMN06296052_104224Not Available-1511001 - 151206239510.9
protein involved in gliding motility gldcSAMN06296052_104225Not Available+1512137 - 151247812991.5
hypothetical proteinSAMN06296052_104226Not Available-1512564 - 151306718670.2
dctp deaminaseSAMN06296052_104227Not Available-1513263 - 151379920427.4
glutamate-1-semialdehyde 2,1-aminomutaseSAMN06296052_104228Not Available-1513942 - 151524346312.4
amino acid/amide abc transporter substrate-binding protein, haat familySAMN06296052_104229Not Available-1515272 - 151696664017.4
gmp synthase (glutamine-hydrolysing)SAMN06296052_104230Not Available-1517062 - 151859156587.1

Displaying genes 1411 – 1420 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites