Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_104140 | Not Available | - | 1424040 - 1424462 | 16269.3 |
| stas domain-containing protein | SAMN06296052_104141 | Not Available | - | 1424767 - 1425180 | 14925.0 |
| atp-dependent rna helicase rhle | SAMN06296052_104142 | Not Available | + | 1425512 - 1426663 | 42559.2 |
| calcineurin-like phosphoesterase | SAMN06296052_104143 | Not Available | - | 1426797 - 1427729 | 36193.5 |
| hypothetical protein | SAMN06296052_104144 | Not Available | - | 1428448 - 1428804 | 13578.3 |
| sos response umud protein. serine peptidase. merops family s24 | SAMN06296052_104145 | Not Available | + | 1429014 - 1429472 | 16541.8 |
| dna polymerase v | SAMN06296052_104146 | Not Available | + | 1429483 - 1430751 | 47577.3 |
| hypothetical protein | SAMN06296052_104147 | Not Available | + | 1431094 - 1431237 | 5136.85 |
| histidine kinase | SAMN06296052_104148 | Not Available | + | 1431608 - 1433128 | 58974.4 |
| two component transcriptional regulator, lyttr family | SAMN06296052_104149 | Not Available | + | 1433762 - 1434439 | 25689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.