Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06296052_10490 | Not Available | - | 1360645 - 1361454 | 30306.9 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_10491 | Not Available | - | 1361454 - 1363790 | 87657.4 |
| outer membrane protein | SAMN06296052_10492 | Not Available | - | 1363956 - 1365311 | 51029.7 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06296052_10493 | Not Available | - | 1365347 - 1367236 | 70663.7 |
| n-terminal domain of toast_rack, duf2154 | SAMN06296052_10494 | Not Available | - | 1367487 - 1368245 | 27162.4 |
| putative abc transport system permease protein | SAMN06296052_10495 | Not Available | - | 1368333 - 1370741 | 89520.8 |
| putative abc transport system atp-binding protein | SAMN06296052_10496 | Not Available | - | 1370722 - 1371441 | 26239.5 |
| hlyd family secretion protein | SAMN06296052_10497 | Not Available | - | 1371577 - 1372827 | 47137.3 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06296052_10498 | Not Available | + | 1373132 - 1374517 | 51257.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06296052_10499 | Not Available | + | 1374507 - 1375889 | 51871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.