Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermine/spermidine n-acetyltransferase | SAMN06296052_10480 | Not Available | + | 1348788 - 1349309 | 20094.9 |
| thioredoxin reductase (nadph) | SAMN06296052_10481 | Not Available | + | 1349396 - 1350379 | 37206.5 |
| hypothetical protein | SAMN06296052_10482 | Not Available | + | 1350480 - 1351124 | 23575.9 |
| 4,5-dopa dioxygenase extradiol | SAMN06296052_10483 | Not Available | + | 1351220 - 1352044 | 30962.3 |
| atp-dependent rna helicase rhle | SAMN06296052_10484 | Not Available | + | 1352265 - 1353590 | 48155.3 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06296052_10485 | Not Available | - | 1354037 - 1354936 | 32643.1 |
| predicted purr-regulated permease perm | SAMN06296052_10486 | Not Available | + | 1355007 - 1356161 | 43151.4 |
| putative atpase | SAMN06296052_10487 | Not Available | + | 1356314 - 1357582 | 47205.1 |
| protease-4 | SAMN06296052_10488 | Not Available | + | 1357770 - 1359533 | 65088.9 |
| purine-nucleoside phosphorylase | SAMN06296052_10489 | Not Available | + | 1359753 - 1360568 | 29766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.