Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10460 | Not Available | - | 1325551 - 1326276 | 26998.0 |
| abc-type sugar transport system, atpase component | SAMN06296052_10461 | Not Available | - | 1326441 - 1327442 | 36762.2 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06296052_10462 | Not Available | + | 1327776 - 1328576 | 29444.1 |
| peptidase family m28 | SAMN06296052_10463 | Not Available | - | 1328646 - 1329944 | 47936.8 |
| hypothetical protein | SAMN06296052_10464 | Not Available | + | 1330199 - 1330516 | 11784.1 |
| uncharacterized membrane protein | SAMN06296052_10465 | Not Available | + | 1330518 - 1331012 | 18332.4 |
| ribosomal-protein-serine acetyltransferase | SAMN06296052_10466 | Not Available | - | 1331119 - 1331694 | 22090.5 |
| ribosomal large subunit pseudouridine synthase e | SAMN06296052_10467 | Not Available | - | 1331756 - 1332397 | 24374.6 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN06296052_10468 | Not Available | - | 1332439 - 1333005 | 21858.0 |
| putative colanic acid biosynthesis acetyltransferase wcab | SAMN06296052_10469 | Not Available | + | 1333300 - 1333833 | 19602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.