Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | SAMN06296052_10450 | Not Available | + | 1313230 - 1315785 | 96130.0 |
| dinb superfamily protein | SAMN06296052_10451 | Not Available | + | 1315869 - 1316465 | 22232.8 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN06296052_10452 | Not Available | + | 1316605 - 1318164 | 56271.2 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN06296052_10453 | Not Available | + | 1318356 - 1319792 | 51965.8 |
| hypothetical protein | SAMN06296052_10454 | Not Available | + | 1319917 - 1320090 | 6813.67 |
| hypothetical protein | SAMN06296052_10455 | Not Available | - | 1320215 - 1320316 | 4018.04 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN06296052_10456 | Not Available | + | 1320347 - 1321345 | 36534.0 |
| replication restart dna helicase pria | SAMN06296052_10457 | Not Available | - | 1321455 - 1323986 | 95865.1 |
| protein of unknown function | SAMN06296052_10458 | Not Available | - | 1324120 - 1324503 | 14452.5 |
| hypothetical protein | SAMN06296052_10459 | Not Available | - | 1324481 - 1325281 | 30332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.