Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfuration protein sufe | SAMN06296052_10440 | Not Available | - | 1302485 - 1302913 | 16351.7 |
| cysteine desulfurase / selenocysteine lyase | SAMN06296052_10441 | Not Available | - | 1302925 - 1304175 | 45955.1 |
| iron-regulated abc transporter permease protein sufd | SAMN06296052_10442 | Not Available | - | 1304182 - 1305525 | 49909.1 |
| iron-regulated abc transporter atpase subunit sufc | SAMN06296052_10443 | Not Available | - | 1305531 - 1306298 | 28735.6 |
| iron-regulated abc transporter membrane component sufb | SAMN06296052_10444 | Not Available | - | 1306317 - 1307771 | 53712.5 |
| iron-sulfur cluster assembly protein | SAMN06296052_10445 | Not Available | - | 1307806 - 1308132 | 11745.8 |
| histidinol-phosphate aminotransferase | SAMN06296052_10446 | Not Available | - | 1308339 - 1310474 | 78262.1 |
| nitroreductase | SAMN06296052_10447 | Not Available | + | 1310764 - 1311348 | 21922.3 |
| hypothetical protein | SAMN06296052_10448 | Not Available | + | 1311357 - 1312070 | 26641.5 |
| conserved hypothetical protein | SAMN06296052_10449 | Not Available | - | 1312130 - 1312804 | 25687.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.