Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted lipoprotein | SAMN06296052_103282 | Not Available | - | 1220652 - 1221575 | 34797.1 |
| phosphatidate phosphatase app1 | SAMN06296052_103283 | Not Available | - | 1221695 - 1222843 | 44218.4 |
| l-serine dehydratase | SAMN06296052_103284 | Not Available | + | 1223088 - 1223996 | 31867.4 |
| hypothetical protein | SAMN06296052_103285 | Not Available | + | 1224330 - 1225061 | 27464.6 |
| protein of unknown function | SAMN06296052_103286 | Not Available | + | 1225212 - 1226387 | 44550.5 |
| asparaginyl-trna synthetase | SAMN06296052_103287 | Not Available | - | 1226522 - 1227475 | 36699.1 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN06296052_103288 | Not Available | + | 1227640 - 1228098 | 17081.8 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN06296052_103289 | Not Available | - | 1228172 - 1228468 | 11653.9 |
| aspartate aminotransferase | SAMN06296052_103290 | Not Available | - | 1228508 - 1229764 | 45978.3 |
| l-lactate dehydrogenase complex protein lldf | SAMN06296052_103291 | Not Available | - | 1230272 - 1231645 | 51232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.