Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN06296052_103262 | Not Available | + | 1200693 - 1202399 | 63424.4 |
| inorganic pyrophosphatase | SAMN06296052_103263 | Not Available | + | 1202430 - 1203035 | 23039.8 |
| hypothetical protein | SAMN06296052_103264 | Not Available | + | 1203150 - 1204055 | 33179.5 |
| nad(p)h-hydrate epimerase | SAMN06296052_103265 | Not Available | - | 1204052 - 1205560 | 54083.1 |
| nad dependent epimerase/dehydratase family protein | SAMN06296052_103266 | Not Available | + | 1206027 - 1206377 | 12910.6 |
| nad dependent epimerase/dehydratase family protein | SAMN06296052_103267 | Not Available | + | 1206389 - 1206955 | 21161.1 |
| gdpmannose 4,6-dehydratase | SAMN06296052_103268 | Not Available | + | 1207008 - 1208120 | 41964.0 |
| carboxypepd_reg-like domain-containing protein | SAMN06296052_103269 | Not Available | - | 1208315 - 1210684 | 89114.7 |
| pap2 superfamily protein | SAMN06296052_103270 | Not Available | - | 1210809 - 1211654 | 30492.1 |
| nadh dehydrogenase subunit d | SAMN06296052_103271 | Not Available | - | 1211833 - 1213047 | 45994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.