Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase is200 like | SAMN06296052_103161 | Not Available | - | 1079806 - 1080324 | 20923.1 |
| hypothetical protein | SAMN06296052_103162 | Not Available | - | 1081160 - 1082197 | 40073.2 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN06296052_103163 | Not Available | - | 1082338 - 1084722 | 89775.8 |
| ribonucleoside-diphosphate reductase beta chain | SAMN06296052_103164 | Not Available | - | 1085078 - 1086037 | 36821.0 |
| lsu ribosomal protein l21p | SAMN06296052_103165 | Not Available | + | 1086624 - 1086983 | 13308.3 |
| large subunit ribosomal protein l27 | SAMN06296052_103166 | Not Available | + | 1087054 - 1087323 | 9505.4 |
| methionine synthase (b12-dependent) | SAMN06296052_103168 | Not Available | + | 1087790 - 1091506 | 136958.0 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN06296052_103169 | Not Available | + | 1091567 - 1092523 | 36075.3 |
| l-2-hydroxyglutarate oxidase | SAMN06296052_103170 | Not Available | + | 1092776 - 1094002 | 44802.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN06296052_103171 | Not Available | - | 1094047 - 1095111 | 39929.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.