Pyrococcus kukulkanii str. NCB100

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus kukulkanii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus kukulkanii str. NCB100

Accession NumberNZ_CP010835.1

Gene Summary

Adenine Count

541989 bp

Thymine Count

552902 bp

Guanine Count

454622 bp

Cytosine Count

427613 bp

Genome Length

1977126 bp

Protein-coding Genes

2201 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tata-box-binding proteinTQ32_RS05535O58737-1035940 - 103651521437.1
dephospho-coa kinaseTQ32_RS05540O58736-1036620 - 103717720995.6
proline--trna ligaseTQ32_RS05545Q8U1C4-1037188 - 103863656365.7
lipopolysaccharide biosynthesis proteinTQ32_RS05550Not Available+1038728 - 104002047600.0
metallophosphoesteraseTQ32_RS05555Not Available-1039989 - 104074728604.7
dead/deah box helicaseTQ32_RS05560Q58969-1040803 - 1043424101592.0
mbl fold metallo-hydrolaseTQ32_RS05565O58730-1043421 - 104434434739.9
Trna-tyrNot AvailableNot Available+1044390 - 1044467Not Available
hit family proteinTQ32_RS05575Q58276+1044559 - 104501417265.0
ai-2e family transporterTQ32_RS05580O58728+1045001 - 104596335764.4

Displaying genes 1151 – 1160 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

104 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 104 metabolites