Jiulongibacter sediminis str. JN14-9

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Jiulongibacter

Description

Jiulongibacter sediminis strain JN14-9 is a Gram-negative, rod-shaped bacterium that exhibits an aerobic metabolism and thrives optimally at a temperature of 29.0°C. This species is part of the microbial diversity found in sedimentary environments, where its aerobic nature suggests a potential role in the degradation of organic matter in oxygen-rich sediments. The Gram-negative cell wall structure of Jiulongibacter sediminis may confer resilience to various environmental stresses, enabling it to survive in its specific ecological niche. The preference for an optimal growth temperature of 29.0°C indicates that this microbe may be well-adapted to moderate thermal conditions, potentially reflecting the temperature profiles of its natural habitat. As an aerobic organism, Jiulongibacter sediminis likely engages in metabolic processes that require oxygen, which could play a significant role in biogeochemical cycles within the sedimentary environments it inhabits. Overall, the traits of Jiulongibacter sediminis strain JN14-9 highlight its potential importance in ecosystem functioning, particularly in processes related to organic matter decomposition and nutrient cycling in aquatic sediments. Understanding the ecological role of this microbe could provide insights into the dynamics of sedimentary microbial communities and their contributions to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusJiulongibacter
SpeciesJiulongibacter sediminis
StrainJN14-9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Jiulongibacter sediminis str. JN14-9


Gene Summary

Adenine Count

1300291 bp

Thymine Count

1311951 bp

Guanine Count

936016 bp

Cytosine Count

925781 bp

Genome Length

4474039 bp

Protein-coding Genes

3642 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+51 - 162Not Available
23s ribosomal rnaNot AvailableNot Available+289 - 3112Not Available
hypothetical proteinAFM12_00010Not Available+2128 - 10415288628.0
16s ribosomal rnaNot AvailableNot Available+3636 - 5158Not Available
hypothetical proteinAFM12_00015Not Available+10416 - 1155840515.4
hypothetical proteinAFM12_00020Not Available+11559 - 1187511108.7
hypothetical proteinAFM12_00025Not Available+11876 - 1251122506.3
dna mismatch repair protein muttAFM12_00030Not Available-12534 - 1324126929.1
hypothetical proteinAFM12_00035Q72FW5+13381 - 1432535258.6
hypothetical proteinAFM12_00040Not Available-14315 - 1503724981.4

Displaying genes 1 – 10 of 3681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

217 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 217 metabolites