Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase | SAMN03159363_0525 | Not Available | - | 545171 - 545851 | 25296.1 |
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN03159363_0526 | Not Available | - | 545926 - 547293 | 48746.6 |
| thiamine biosynthesis lipoprotein | SAMN03159363_0527 | Not Available | - | 547290 - 548297 | 35753.1 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN03159363_0528 | Not Available | - | 548311 - 549120 | 28825.2 |
| hypothetical protein | SAMN03159363_0529 | Not Available | - | 549176 - 549709 | 19236.1 |
| hypothetical protein | SAMN03159363_0530 | Not Available | - | 549741 - 550385 | 24225.2 |
| bacterioferritin | SAMN03159363_0531 | Not Available | - | 550521 - 550997 | 18154.8 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN03159363_0532 | Not Available | + | 551258 - 551821 | 20612.6 |
| alkyl hydroperoxide reductase subunit f | SAMN03159363_0533 | Not Available | + | 551913 - 553469 | 55632.7 |
| hemoglobin/transferrin/lactoferrin receptor protein | SAMN03159363_0534 | Not Available | + | 553614 - 555851 | 82737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.