Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | SAMN03159363_0434 | Not Available | - | 454280 - 455860 | 55916.2 |
| trap transporter, dctm subunit | SAMN03159363_0435 | Not Available | - | 455879 - 457231 | 47964.7 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN03159363_0436 | Not Available | - | 457222 - 457716 | 17632.0 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN03159363_0437 | Not Available | - | 457859 - 458851 | 35954.6 |
| sugar lactone lactonase yvre | SAMN03159363_0438 | Not Available | - | 458910 - 459800 | 31766.8 |
| uronate dehydrogenase | SAMN03159363_0439 | Not Available | - | 459790 - 460608 | 30015.4 |
| polar amino acid transport system substrate-binding protein | SAMN03159363_0440 | Not Available | - | 460622 - 461416 | 28646.7 |
| polar amino acid transport system atp-binding protein | SAMN03159363_0441 | Not Available | - | 461474 - 462202 | 26472.5 |
| polar amino acid transport system permease protein | SAMN03159363_0442 | Not Available | - | 462186 - 462842 | 24351.8 |
| polar amino acid transport system permease protein | SAMN03159363_0443 | Not Available | - | 462839 - 463588 | 27227.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.