Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | SAMN03159363_0888 | Not Available | - | 929928 - 930551 | 22201.5 |
| streptomycin 6-kinase | SAMN03159363_0889 | Not Available | - | 930860 - 931678 | 29426.2 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN03159363_0890 | Not Available | - | 931727 - 932296 | 19774.8 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN03159363_0891 | Not Available | + | 932485 - 933483 | 36730.7 |
| transcriptional regulator, arac family | SAMN03159363_0892 | Not Available | - | 933490 - 934506 | 37826.8 |
| enoyl-coa hydratase/carnithine racemase | SAMN03159363_0893 | Not Available | + | 934649 - 935440 | 27857.8 |
| small gtp-binding protein domain-containing protein | SAMN03159363_0894 | Not Available | - | 935451 - 936869 | 50975.7 |
| protein of unknown function | SAMN03159363_0895 | Not Available | - | 936866 - 938302 | 51275.5 |
| type vi secretion system protein impf | SAMN03159363_0896 | Not Available | + | 938707 - 939294 | 21755.9 |
| type vi secretion system protein impg | SAMN03159363_0897 | Not Available | + | 939364 - 941244 | 69930.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.