Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_0818 | Not Available | + | 853530 - 854690 | 40666.0 |
| branched-chain amino acid transport system permease protein | SAMN03159363_0819 | Not Available | + | 854735 - 855568 | 29287.3 |
| amino acid/amide abc transporter membrane protein 2, haat family (tc 3.a.1.4.-)/amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN03159363_0820 | Not Available | + | 855579 - 857384 | 62868.5 |
| amino acid/amide abc transporter atp-binding protein 2, haat family (tc 3.a.1.4.-) | SAMN03159363_0821 | Not Available | + | 857381 - 858097 | 25917.7 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_0822 | Not Available | + | 858185 - 859333 | 42953.9 |
| two-component response regulator, amir/nast family, consists of rec and rna-binding antiterminator (antar) domains | SAMN03159363_0823 | Not Available | + | 859394 - 860014 | 22936.8 |
| hypothetical protein | SAMN03159363_0824 | Not Available | - | 859888 - 861234 | 49079.1 |
| hypothetical protein | SAMN03159363_0825 | Not Available | + | 861469 - 861885 | 14842.8 |
| phage shock protein a (pspa) family protein | SAMN03159363_0826 | Not Available | + | 861898 - 862614 | 26014.8 |
| hypothetical protein | SAMN03159363_0827 | Not Available | + | 862611 - 862970 | 13025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.