Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, multidrug efflux system | SAMN03159363_0002 | Not Available | - | 426 - 1871 | 50889.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN03159363_0003 | Not Available | - | 1871 - 5050 | 113094.0 |
| membrane fusion protein, multidrug efflux system | SAMN03159363_0004 | Not Available | - | 5060 - 6292 | 42594.9 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN03159363_0005 | Not Available | - | 6434 - 7105 | 25373.8 |
| rhomboid family protein | SAMN03159363_0006 | Not Available | - | 7262 - 8740 | 55740.5 |
| argininosuccinate lyase | SAMN03159363_0007 | Not Available | - | 8763 - 10160 | 51353.9 |
| two-component system, lytt family, sensor histidine kinase algz | SAMN03159363_0008 | Not Available | + | 10208 - 11293 | 39051.6 |
| two component transcriptional regulator, lyttr family | SAMN03159363_0009 | Not Available | + | 11290 - 12036 | 27690.2 |
| predicted purr-regulated permease perm | SAMN03159363_0010 | Not Available | + | 12033 - 13391 | 48308.0 |
| transcriptional regulator, tetr family | SAMN03159363_0011 | Not Available | - | 13395 - 13976 | 20160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.