Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase gamma chain | SAMN03159363_0798 | Not Available | + | 831720 - 832478 | 26691.5 |
| gluconate 2-dehydrogenase alpha chain | SAMN03159363_0799 | Not Available | + | 832492 - 834264 | 64493.6 |
| cytochrome c, mono-and diheme variants | SAMN03159363_0800 | Not Available | + | 834261 - 835649 | 48526.6 |
| arac-type dna-binding protein | SAMN03159363_0801 | Not Available | - | 835678 - 836565 | 32219.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03159363_0802 | Not Available | + | 836703 - 837455 | 25987.1 |
| catechol 2,3-dioxygenase | SAMN03159363_0803 | Not Available | + | 837476 - 837883 | 14437.8 |
| haloacid dehalogenase-like hydrolase | SAMN03159363_0804 | Not Available | - | 837902 - 839164 | 46214.0 |
| ethanolamine ammonia-lyase light chain | SAMN03159363_0805 | Not Available | - | 839252 - 840031 | 28114.7 |
| ethanolamine ammonia-lyase heavy chain | SAMN03159363_0806 | Not Available | - | 840028 - 841422 | 50148.2 |
| ethanolamine:proton symporter, eat family | SAMN03159363_0807 | Not Available | - | 841430 - 842842 | 50073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.