Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN03159363_0737 | Not Available | + | 769470 - 770693 | 43367.1 |
| hypothetical protein | SAMN03159363_0738 | Not Available | + | 770743 - 771426 | 24897.3 |
| hypothetical protein | SAMN03159363_0739 | Not Available | - | 771450 - 771854 | 15217.9 |
| putative tricarboxylic transport membrane protein | SAMN03159363_0740 | Not Available | - | 771880 - 772893 | 35562.8 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN03159363_0741 | Not Available | - | 772916 - 774334 | 50986.2 |
| two-component system, ompr family, response regulator tctd | SAMN03159363_0742 | Not Available | - | 774335 - 775000 | 24747.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_0743 | Not Available | - | 775026 - 776033 | 35598.9 |
| transcriptional regulator, iclr family | SAMN03159363_0744 | Not Available | - | 776123 - 776908 | 28860.9 |
| shikimate dehydrogenase | SAMN03159363_0745 | Not Available | + | 777109 - 778032 | 32735.5 |
| shikimate dehydrogenase | SAMN03159363_0746 | Not Available | + | 778063 - 778896 | 29474.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.