Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0687 | Not Available | + | 712320 - 712823 | 18444.4 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN03159363_0688 | Not Available | - | 712830 - 713450 | 23356.4 |
| membrane-bound lytic murein transglycosylase b | SAMN03159363_0689 | Not Available | - | 713456 - 714553 | 39858.6 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN03159363_0690 | Not Available | - | 714608 - 716632 | 74726.7 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN03159363_0691 | Not Available | - | 716626 - 717603 | 35267.6 |
| moxr-like atpase | SAMN03159363_0692 | Not Available | - | 717671 - 718591 | 32912.0 |
| acetoin utilization deacetylase acuc | SAMN03159363_0693 | Not Available | + | 718670 - 719623 | 35081.6 |
| mechanosensitive ion channel | SAMN03159363_0694 | Not Available | + | 719623 - 720942 | 47787.0 |
| electron transfer flavoprotein beta subunit | SAMN03159363_0695 | Not Available | + | 721080 - 721829 | 26889.0 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN03159363_0696 | Not Available | + | 721832 - 722764 | 31226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.