Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0656 | Not Available | - | 674789 - 675358 | 21207.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN03159363_0657 | Not Available | - | 675453 - 675911 | 15757.1 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN03159363_0658 | Not Available | - | 675908 - 676882 | 35708.8 |
| amino acid abc transporter substrate-binding protein, paat family (tc 3.a.1.3.-) | SAMN03159363_0659 | Not Available | - | 676913 - 677728 | 28446.8 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN03159363_0660 | Not Available | - | 677856 - 680684 | 101732.0 |
| uncharacterized conserved protein, duf2126 family | SAMN03159363_0661 | Not Available | - | 680748 - 684251 | 130335.0 |
| competence protein comec | SAMN03159363_0662 | Not Available | + | 684423 - 686858 | 86887.5 |
| enoyl-coa hydratase/carnithine racemase | SAMN03159363_0663 | Not Available | + | 687061 - 687906 | 29865.8 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN03159363_0664 | Not Available | + | 688002 - 689516 | 56331.6 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN03159363_0665 | Not Available | + | 689546 - 690502 | 36673.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.