Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase | SAMN03159363_0636 | Not Available | + | 653020 - 654003 | 34884.2 |
| transcriptional regulator, laci family | SAMN03159363_0637 | Not Available | + | 654269 - 655291 | 36227.4 |
| choline dehydrogenase | SAMN03159363_0638 | Not Available | - | 655194 - 656915 | 61161.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN03159363_0639 | Not Available | + | 657165 - 658727 | 57109.1 |
| two component transcriptional regulator, luxr family | SAMN03159363_0640 | Not Available | + | 658758 - 659405 | 23104.8 |
| hypothetical protein | SAMN03159363_0641 | Not Available | + | 659573 - 661777 | 78046.6 |
| hypothetical protein | SAMN03159363_0642 | Not Available | + | 661965 - 662513 | 19874.7 |
| nitt/taut family transport system substrate-binding protein | SAMN03159363_0643 | Not Available | + | 662799 - 663830 | 36775.6 |
| nitt/taut family transport system atp-binding protein | SAMN03159363_0644 | Not Available | + | 663835 - 664617 | 28951.2 |
| nitt/taut family transport system permease protein | SAMN03159363_0645 | Not Available | + | 664628 - 665476 | 30786.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.