Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN03159363_0615 | Not Available | - | 631413 - 632303 | 31800.7 |
| methyltransferase domain-containing protein | SAMN03159363_0616 | Not Available | - | 632383 - 632952 | 20063.0 |
| hypothetical protein | SAMN03159363_0617 | Not Available | - | 632979 - 633119 | 5152.42 |
| predicted arabinose efflux permease, mfs family | SAMN03159363_0618 | Not Available | - | 633138 - 634361 | 42976.5 |
| predicted arabinose efflux permease, mfs family | SAMN03159363_0619 | Not Available | - | 634471 - 635679 | 41423.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN03159363_0620 | Not Available | - | 635672 - 636877 | 42438.2 |
| transcriptional regulator, lysr family | SAMN03159363_0621 | Not Available | + | 636968 - 637876 | 32924.7 |
| topoisomerase-4 subunit b | SAMN03159363_0622 | Not Available | + | 637952 - 639949 | 72273.2 |
| transglycosylase slt domain-containing protein | SAMN03159363_0623 | Not Available | + | 639986 - 640966 | 34521.5 |
| topoisomerase-4 subunit a | SAMN03159363_0624 | Not Available | + | 641005 - 643419 | 86786.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.