Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN03159363_0605 | Not Available | + | 623899 - 625122 | 43605.9 |
| hypothetical protein | SAMN03159363_0606 | Not Available | + | 625122 - 625580 | 15985.3 |
| dutp pyrophosphatase | SAMN03159363_0607 | Not Available | + | 625581 - 626027 | 15879.2 |
| glycine zipper 2tm domain-containing protein | SAMN03159363_0608 | Not Available | + | 626201 - 626701 | 17302.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN03159363_0609 | Not Available | - | 626776 - 627300 | 18913.4 |
| 50s ribosomal protein l16 3-hydroxylase | SAMN03159363_0610 | Not Available | + | 627315 - 628457 | 41874.2 |
| hypothetical protein | SAMN03159363_0611 | Not Available | + | 628447 - 628947 | 18770.2 |
| hypothetical protein | SAMN03159363_0612 | Not Available | + | 629042 - 629296 | 7933.4 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN03159363_0613 | Not Available | - | 629398 - 630174 | 27591.8 |
| beta-barrel assembly machine subunit bamc | SAMN03159363_0614 | Not Available | - | 630180 - 631271 | 40176.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.