Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_0565 | Not Available | - | 582644 - 583639 | 34977.5 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN03159363_0566 | Not Available | + | 583781 - 586402 | 95805.2 |
| hypothetical protein | SAMN03159363_0567 | Not Available | + | 586409 - 586753 | 12173.9 |
| acetyl-coa c-acetyltransferase | SAMN03159363_0568 | Not Available | + | 586880 - 588064 | 40801.2 |
| ribosome-associated protein | SAMN03159363_0569 | Not Available | + | 588081 - 588488 | 15058.1 |
| hypothetical protein | SAMN03159363_0570 | Not Available | + | 588514 - 589089 | 20247.4 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_0571 | Not Available | - | 589141 - 590025 | 32540.3 |
| sulfate permease, sulp family | SAMN03159363_0572 | Not Available | - | 590036 - 591763 | 60415.0 |
| protein of unknown function | SAMN03159363_0573 | Not Available | - | 591931 - 592386 | 15249.4 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN03159363_0574 | Not Available | - | 592478 - 593833 | 47479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.