Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_6475 | Not Available | + | 6948343 - 6949092 | 27241.5 |
| hypothetical protein | SAMN03159363_6476 | Not Available | + | 6949120 - 6950292 | 41213.2 |
| caspase domain-containing protein | SAMN03159363_6477 | Not Available | + | 6950418 - 6952403 | 70932.5 |
| type vi secretion system effector, hcp | SAMN03159363_6478 | Not Available | + | 6952422 - 6952976 | 19490.3 |
| type vi secretion system protein impe | SAMN03159363_6479 | Not Available | + | 6952999 - 6953838 | 30754.7 |
| type vi secretion system protein impf | SAMN03159363_6480 | Not Available | + | 6953831 - 6954346 | 19254.2 |
| type vi secretion system protein impg | SAMN03159363_6481 | Not Available | + | 6954357 - 6956249 | 69987.1 |
| type vi secretion system protein imph | SAMN03159363_6482 | Not Available | + | 6956225 - 6957328 | 40878.7 |
| type vi secretion system protein vasg | SAMN03159363_6483 | Not Available | + | 6957399 - 6960179 | 100459.0 |
| type vi secretion system secreted protein vgrg | SAMN03159363_6484 | Not Available | + | 6960210 - 6963095 | 103550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.