Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN03159363_6415 | Not Available | + | 6885757 - 6886665 | 32017.4 |
| zinc protease | SAMN03159363_6416 | Not Available | - | 6886690 - 6888036 | 47853.4 |
| zinc protease | SAMN03159363_6417 | Not Available | - | 6888051 - 6889427 | 49863.2 |
| fused signal recognition particle receptor | SAMN03159363_6418 | Not Available | + | 6889871 - 6890833 | 33757.0 |
| hypothetical protein | SAMN03159363_6419 | Not Available | - | 6890939 - 6891934 | 34009.7 |
| signal transduction histidine kinase | SAMN03159363_6420 | Not Available | - | 6892094 - 6893872 | 64923.9 |
| two component transcriptional regulator, luxr family | SAMN03159363_6421 | Not Available | - | 6893884 - 6894591 | 24650.7 |
| uncharacterized membrane protein ygl010w | SAMN03159363_6422 | Not Available | + | 6894767 - 6895231 | 17140.5 |
| rna polymerase sigma-32 factor | SAMN03159363_6423 | Not Available | + | 6895548 - 6896489 | 34477.2 |
| 3-methyladenine dna glycosylase alkc | SAMN03159363_6424 | Not Available | - | 6896542 - 6897378 | 30872.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.