Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad+ kinase | SAMN03159363_6375 | Not Available | + | 6847757 - 6848671 | 32864.4 |
| dna repair protein recn (recombination protein n) | SAMN03159363_6376 | Not Available | + | 6848673 - 6850355 | 59692.5 |
| upf0042 nucleotide-binding protein | SAMN03159363_6377 | Not Available | + | 6850352 - 6851227 | 32828.3 |
| a/g-specific dna-adenine glycosylase | SAMN03159363_6378 | Not Available | - | 6851232 - 6852359 | 41511.9 |
| dynamin family protein | SAMN03159363_6379 | Not Available | - | 6852304 - 6854271 | 73448.3 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN03159363_6380 | Not Available | - | 6854360 - 6855172 | 29719.3 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN03159363_6381 | Not Available | + | 6855254 - 6857104 | 67317.2 |
| outer membrane lipoprotein lolb | SAMN03159363_6382 | Not Available | + | 6857101 - 6857619 | 18117.5 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN03159363_6383 | Not Available | + | 6857616 - 6858497 | 31532.9 |
| Trna-gln | Not Available | Not Available | + | 6858567 - 6858643 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.