Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama domain-containing membrane protein rard | SAMN03159363_6335 | Not Available | + | 6818621 - 6819475 | 29551.1 |
| hypothetical protein | SAMN03159363_6336 | Not Available | + | 6819551 - 6819874 | 11435.7 |
| hypothetical protein | SAMN03159363_6337 | Not Available | + | 6820028 - 6820405 | 13447.1 |
| pilin (type 1 fimbria component protein) | SAMN03159363_6338 | Not Available | - | 6820436 - 6821452 | 36007.7 |
| outer membrane usher protein | SAMN03159363_6339 | Not Available | - | 6821449 - 6824130 | 96129.8 |
| fimbrial chaperone protein | SAMN03159363_6340 | Not Available | - | 6824150 - 6824926 | 28019.8 |
| major type 1 subunit fimbrin (pilin) | SAMN03159363_6341 | Not Available | - | 6825132 - 6825704 | 18871.5 |
| hypothetical protein | SAMN03159363_6342 | Not Available | - | 6825877 - 6826917 | 37089.0 |
| signal transduction histidine kinase | SAMN03159363_6343 | Not Available | - | 6827023 - 6828420 | 52566.9 |
| two-component system, ompr family, response regulator rpab | SAMN03159363_6344 | Not Available | - | 6828417 - 6829160 | 27803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.