Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative mrna 3-end processing factor | SAMN03159363_6305 | Not Available | - | 6791275 - 6792387 | 39854.9 |
| protein of unknown function | SAMN03159363_6306 | Not Available | - | 6792498 - 6793028 | 18594.5 |
| pap2 superfamily protein | SAMN03159363_6307 | Not Available | - | 6793108 - 6793809 | 25156.1 |
| predicted dehydrogenase | SAMN03159363_6308 | Not Available | - | 6793859 - 6795022 | 41605.4 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN03159363_6309 | Not Available | - | 6795022 - 6795456 | 15613.4 |
| ribose transport system substrate-binding protein | SAMN03159363_6310 | Not Available | - | 6795523 - 6796485 | 34428.3 |
| ribose transport system permease protein | SAMN03159363_6311 | Not Available | - | 6796541 - 6797575 | 35801.5 |
| ribose transport system atp-binding protein | SAMN03159363_6312 | Not Available | - | 6797538 - 6799079 | 55463.2 |
| rok family protein (putative glucokinase) | SAMN03159363_6313 | Not Available | - | 6799076 - 6800278 | 41931.0 |
| atp synthase f1 subcomplex epsilon subunit | SAMN03159363_6314 | Not Available | - | 6800491 - 6800910 | 14789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.