Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN03159363_6285 | Not Available | + | 6770165 - 6770929 | 28171.4 |
| hypothetical protein | SAMN03159363_6286 | Not Available | - | 6770973 - 6771200 | 8687.26 |
| Trna-arg | Not Available | Not Available | + | 6771253 - 6771327 | Not Available |
| transcriptional regulator, tetr family | SAMN03159363_6288 | Not Available | - | 6771370 - 6772050 | 24956.0 |
| membrane fusion protein, multidrug efflux system | SAMN03159363_6289 | Not Available | + | 6772231 - 6773535 | 44747.6 |
| multidrug efflux pump | SAMN03159363_6290 | Not Available | + | 6773552 - 6776716 | 112435.0 |
| outer membrane protein, multidrug efflux system | SAMN03159363_6291 | Not Available | + | 6776709 - 6778127 | 50437.8 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN03159363_6292 | Not Available | + | 6778244 - 6778885 | 21524.6 |
| protein of unknown function | SAMN03159363_6293 | Not Available | - | 6778953 - 6779510 | 20472.1 |
| hypothetical protein | SAMN03159363_6294 | Not Available | - | 6779515 - 6780540 | 36532.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.