Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN03159363_6204 | Not Available | - | 6675309 - 6677036 | 62812.9 |
| histidine ammonia-lyase | SAMN03159363_6205 | Not Available | - | 6677080 - 6678639 | 53660.1 |
| gntr family transcriptional regulator, histidine utilization repressor | SAMN03159363_6206 | Not Available | - | 6678820 - 6679557 | 27670.0 |
| nitt/taut family transport system atp-binding protein | SAMN03159363_6207 | Not Available | - | 6679569 - 6680363 | 29441.6 |
| nitt/taut family transport system permease protein | SAMN03159363_6208 | Not Available | - | 6680348 - 6681145 | 28583.9 |
| nitt/taut family transport system substrate-binding protein | SAMN03159363_6209 | Not Available | - | 6681216 - 6682184 | 33852.9 |
| atp-dependent dna helicase recq | SAMN03159363_6210 | Not Available | + | 6682477 - 6684372 | 69180.6 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN03159363_6211 | Not Available | - | 6684391 - 6685587 | 41958.0 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN03159363_6212 | Not Available | - | 6685745 - 6687358 | 55782.5 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN03159363_6213 | Not Available | - | 6687485 - 6689809 | 85785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.