Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN03159363_6174 | Not Available | - | 6642430 - 6643224 | 28763.2 |
| branched-chain amino acid transport system permease protein | SAMN03159363_6175 | Not Available | - | 6643221 - 6645152 | 68961.0 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_6176 | Not Available | - | 6645237 - 6646445 | 43837.5 |
| amino acid synthesis | SAMN03159363_6177 | Not Available | - | 6646510 - 6647094 | 20275.5 |
| amino acid synthesis | SAMN03159363_6178 | Not Available | - | 6647146 - 6647787 | 22713.5 |
| hypothetical protein | SAMN03159363_6179 | Not Available | - | 6647809 - 6648714 | 32537.0 |
| hypothetical protein | SAMN03159363_6180 | Not Available | - | 6648876 - 6650513 | 57756.2 |
| ferredoxin--nadp+ reductase | SAMN03159363_6181 | Not Available | + | 6650817 - 6651590 | 29183.1 |
| transcriptional regulator, tetr family | SAMN03159363_6182 | Not Available | + | 6651613 - 6652377 | 28559.8 |
| enamidase | SAMN03159363_6183 | Not Available | + | 6652332 - 6653531 | 41481.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.