Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system secreted protein hcp | SAMN03159363_6164 | Not Available | - | 6630075 - 6630557 | 17209.3 |
| type vi secretion system protein impc | SAMN03159363_6165 | Not Available | - | 6630606 - 6632114 | 56377.3 |
| type vi secretion system protein impb | SAMN03159363_6166 | Not Available | - | 6632175 - 6632747 | 20752.7 |
| type vi secretion system protein impa | SAMN03159363_6167 | Not Available | - | 6632827 - 6633927 | 39825.3 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN03159363_6168 | Not Available | - | 6634077 - 6635261 | 41356.5 |
| nicotinate dehydrogenase subunit b | SAMN03159363_6169 | Not Available | - | 6635338 - 6639090 | 133319.0 |
| nicotinate dehydrogenase subunit a | SAMN03159363_6170 | Not Available | - | 6639242 - 6639742 | 17265.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN03159363_6171 | Not Available | - | 6639720 - 6640880 | 41282.8 |
| nicotinamidase/pyrazinamidase | SAMN03159363_6172 | Not Available | - | 6640945 - 6641670 | 25433.5 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_6173 | Not Available | - | 6641699 - 6642433 | 26981.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.