Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03159363_6154 | Not Available | - | 6615298 - 6615942 | 22740.3 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN03159363_6155 | Not Available | - | 6615996 - 6617045 | 38536.6 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN03159363_6156 | Not Available | - | 6617042 - 6619753 | 99597.4 |
| hypothetical protein | SAMN03159363_6157 | Not Available | - | 6619772 - 6620212 | 16519.4 |
| type vi secretion system secreted protein vgrg | SAMN03159363_6158 | Not Available | - | 6620212 - 6622581 | 87665.1 |
| type vi secretion system protein vasg | SAMN03159363_6159 | Not Available | - | 6622602 - 6625337 | 98549.1 |
| type vi secretion system protein imph | SAMN03159363_6160 | Not Available | - | 6625334 - 6626527 | 43951.4 |
| type vi secretion system protein impg | SAMN03159363_6161 | Not Available | - | 6626524 - 6628395 | 69413.6 |
| type vi secretion system protein impf | SAMN03159363_6162 | Not Available | - | 6628517 - 6629056 | 20016.0 |
| type vi secretion system protein impe | SAMN03159363_6163 | Not Available | - | 6629053 - 6629919 | 31012.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.