Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| non-specific serine/threonine protein kinase | SAMN03159363_6144 | Not Available | - | 6601526 - 6603577 | 71396.2 |
| type vi secretion system protein impm | SAMN03159363_6145 | Not Available | - | 6603621 - 6604334 | 25820.4 |
| type vi secretion system protein impl | SAMN03159363_6146 | Not Available | - | 6604340 - 6607999 | 135463.0 |
| type vi secretion system protein impk | SAMN03159363_6147 | Not Available | - | 6607999 - 6609363 | 48836.4 |
| type vi secretion system protein impj | SAMN03159363_6148 | Not Available | - | 6609372 - 6610748 | 50848.1 |
| type vi secretion system protein vasd | SAMN03159363_6149 | Not Available | - | 6610912 - 6611427 | 18827.6 |
| hypothetical protein | SAMN03159363_6150 | Not Available | + | 6611559 - 6611972 | 15212.2 |
| fha domain protein | SAMN03159363_6151 | Not Available | + | 6612024 - 6614105 | 72222.0 |
| serine/threonine protein phosphatase prpc | SAMN03159363_6152 | Not Available | + | 6614098 - 6614889 | 28396.3 |
| protein of unknown function | SAMN03159363_6153 | Not Available | - | 6614902 - 6615282 | 13597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.