Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | SAMN03159363_6124 | Not Available | - | 6572201 - 6573310 | 40168.1 |
| major facilitator superfamily protein | SAMN03159363_6125 | Not Available | + | 6573496 - 6574800 | 46656.1 |
| eama domain-containing membrane protein rard | SAMN03159363_6126 | Not Available | + | 6574862 - 6575752 | 30985.4 |
| glutathione peroxidase | SAMN03159363_6127 | Not Available | + | 6575763 - 6576251 | 17501.9 |
| hypothetical protein | SAMN03159363_6128 | Not Available | - | 6576214 - 6576687 | 17194.5 |
| outer membrane protein ompa and related peptidoglycan-associated (lipo)proteins | SAMN03159363_6129 | Not Available | - | 6576691 - 6577551 | 31078.0 |
| head domain of trimeric autotransporter adhesin | SAMN03159363_6130 | Not Available | - | 6577572 - 6585062 | 231113.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03159363_6131 | Not Available | + | 6585379 - 6586116 | 27868.2 |
| fecr family protein | SAMN03159363_6132 | Not Available | + | 6586116 - 6587567 | 51419.4 |
| sensor domain chase2-containing protein | SAMN03159363_6133 | Not Available | + | 6587577 - 6589982 | 86877.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.