Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada/sms | SAMN03159363_6104 | Not Available | - | 6554372 - 6555763 | 48501.6 |
| homoprotocatechuate degradation operon regulator, hpar | SAMN03159363_6105 | Not Available | + | 6555863 - 6556297 | 16353.8 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN03159363_6106 | Not Available | + | 6556294 - 6556929 | 22406.1 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN03159363_6107 | Not Available | + | 6556926 - 6557708 | 29093.7 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN03159363_6108 | Not Available | + | 6557705 - 6559168 | 52196.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_6109 | Not Available | + | 6559207 - 6560175 | 33744.8 |
| aromatic-ring-opening dioxygenase ligab, liga subunit | SAMN03159363_6110 | Not Available | + | 6560179 - 6560514 | 12226.7 |
| 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | SAMN03159363_6111 | Not Available | + | 6560511 - 6561338 | 30174.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN03159363_6112 | Not Available | + | 6561361 - 6561768 | 14865.8 |
| 2-oxo-hept-3-ene-1,7-dioate hydratase | SAMN03159363_6113 | Not Available | + | 6561782 - 6562585 | 29278.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.