Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| simple sugar transport system substrate-binding protein | SAMN03159363_6084 | Not Available | - | 6533663 - 6534781 | 39748.0 |
| protein of unknown function | SAMN03159363_6085 | Not Available | - | 6534837 - 6535217 | 14378.9 |
| allophanate hydrolase | SAMN03159363_6086 | Not Available | - | 6535214 - 6536938 | 59492.1 |
| peptidase family m48 | SAMN03159363_6087 | Not Available | - | 6537159 - 6537941 | 27604.4 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN03159363_6088 | Not Available | + | 6538080 - 6539465 | 49250.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN03159363_6089 | Not Available | + | 6539586 - 6540794 | 41773.5 |
| beta-ketoacyl synthase, n-terminal domain | SAMN03159363_6090 | Not Available | + | 6540791 - 6541633 | 28781.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03159363_6091 | Not Available | + | 6541820 - 6542542 | 26667.4 |
| signal transduction histidine kinase | SAMN03159363_6092 | Not Available | + | 6542553 - 6543749 | 43281.1 |
| o-antigen ligase | SAMN03159363_6093 | Not Available | + | 6543874 - 6545097 | 44809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.